生体物質工学研究グループ
成果発表

1.原著論文(査読有り, 2015年以降)

2019

  • Itoh, H., Kawano, K., Kihara, M.: Draft Genome Sequence of Agarivorans sp. Strain Toyoura001, Isolated from an Abalone Gut. Microbiol Resour Announc. 8(19):e00169-19 (2019). DOI:10.1128/MRA.00169-19
  • Ohbayashi, T., Itoh, H., Lachat, J., Kikuchi, Y., and Mergaert, P.: Burkholderia gut symbionts associated with European and Japanese populations of the dock bug Coreus marginatus (Coreoidea : Coreidae). Microbes Environ. (2019). DOI:10.1264/jsme2.ME19011
  • Kato, S., Wada, K., Kitagawa, W., Mayumi, D., Ikarashi, M., Sone, T., Asano, K., Kamagata, Y.: Conductive Iron Oxides Promote Methanogenic Acetate Degradation by Microbial Communities in a High-Temperature Petroleum Reservoir. Microbes Environ. 34(1):95-98 (2019). DOI:10.1264/jsme2.ME18140
  • Ohbayashi, T., Futahashi, R., Terashima, M., Barrière, Q., Lamouche, F., Takeshita, K., Meng, XY., Mitani, Y., Sone, T., Shigenobu, S., Fukatsu, T., Mergaert, P. Kikuchi, Y.: Comparative cytology, physiology and transcriptomics of Burkholderia insecticola in symbiosis with the bean bug Riptortus pedestris and in culture. ISME J. 13(6):1469-1483 (2019). DOI:10.1038/s41396-019-0361-8
  • Yoshida, K., Kitagawa, W., Ishiya, K., Mitani, Y., Nakashima, N., Aburatani, S., Tamura, T.: Genome Sequence of Rhodococcus erythropolis Type Strain JCM 3201. Microbiol Resour Announc. 8(14):e01730-18 (2019). DOI:10.1128/MRA.01730-18
  • Igarashi, K.: Draft Genome Sequence of Thermosipho globiformans Strain MN14. Microbiol Resour Announc. 8(9):e01728-18 (2019). DOI:10.1128/MRA.01728-18
  • Gabriel, G.V.M., Yasuno, R., Mitani, Y., Ohmiya, Y., Viviani, V.R.: Novel application of Macrolampis sp2 firefly luciferase for intracellular pH-biosensing in mammalian cells. Photochem. Photobiol. Sci. 18:1212-1217 (2019). DOI:10.1039/C8PP00573G

2018

  • Tanaka, K., Yokoe, S., Igarashi, K., Takashino, M., Ishikawa, M., Hori, K., Nakanishi, S., Kato, S.: Extracellular Electron Transfer via Outer Membrane Cytochromes in a Methanotrophic Bacterium Methylococcus capsulatus (Bath) Front. Microbiol. 9:2905 (2018). DOI:10.3389/fmicb.2018.02905
  • Kanie, S., Nakai, R., Ojika, M., Oba, Y.: 2-S-cysteinylhydroquinone is an intermediate for the firefly luciferin biosynthesis that occurs in the pupal stage of the Japanese firefly, Luciola lateralis. Bioorg. Chem. 80:223-229 (2018). DOI:10.1016/j.bioorg.2018.06.028
  • Ishikawa, M., Yokoe, S., Kato, S., Hori, K.: Efficient Counterselection for Methylococcus capsulatus (Bath) by Using a Mutated pheS Gene. Appl. Environ. Microbiol. 84(23):e01875-18 (2018). DOI:10.1128/AEM.01875-18
  • Kato, S., Yamagishi, A., Daimon, S., Kawasaki, K., Tamaki, H., Kitagawa, W., Abe, A., Tanaka, M., Sone, T., Asano, K., Kamagata, Y.: Isolation of Previously Uncultured Slow-Growing Bacteria by Using a Simple Modification in the Preparation of Agar Media. Appl. Environ. Microbiol. 84(19):e00807-18 (2018). DOI:10.1128/AEM.00807-18
  • Mitani, Y., Yasuno, R., Isaka, M., Mitsuda, N., Futahashi, R., Kamagata, Y., Ohmiya, Y.: Novel gene encoding a unique luciferase from the fireworm Odontsyllis undecimdonta. Sci. Rep. 24;8(1):12789 (2018) DOI:10.1038/s41598-018-31086-1
  • Takeshita, K., Tamaki, H., Ohbayashi, T., Meng, XY., Sone, T., Mitani, Y., Peeters, C., Kikuchi, Y., Vandamme, P.: Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean bug Riptortus pedestris. Int. J. Syst. Evol. Microbiol. 68(7):2370-2374 (2018). DOI:10.1099/ijsem.0.002848
  • Kato, S., Igarashi, K.: Enhancement of methanogenesis by electric syntrophy with biogenic iron-sulfide minerals. Microbiologyopen. 8(3):e00647 (2019). DOI:10.1002/mbo3.647
  • Aoyagi, T., Morishita, F., Sugiyama, Y., Ichikawa, D., Mayumi, D., Kikuchi, Y., Ogata, A., Muraoka, K., Habe, H., Hori, T.: Identification of active and taxonomically diverse 1,4-dioxane degraders in a full-scale activated sludge system by high-sensitivity stable isotope probing. ISME J. 12(10):2376-2388 (2018). DOI:10.1038/s41396-018-0201-2
  • Itoh, H., Tago, K., Hayatsu, M., Kikuchi, Y.: Detoxifying symbiosis: microbe-mediated detoxification of phytotoxins and pesticides in insects. Nat. Prod. Rep. 35(5):434-454 (2018). DOI:10.1039/C7NP00051K
  • Masuda, Y., Itoh, H., Shiratori, Y., Senoo, K.: Metatranscriptomic insights into microbial consortia driving methane metabolism in paddy soils. Soil Sci. Plant Nutr. 64(4):455-464 (2018). DOI:10.1080/00380768.2018.1457409
  • Sasaki, K., Sasaki, D., Kamiya, K., Nakanishi, S., Kondo, A., Kato, S.: Electrochemical biotechnologies minimizing the required electrode assemblies. Curr. Opin. Biotechnol. 50:182-188 (2018). DOI:10.1016/j.copbio.2018.01.016
  • Itoh, H., Hori, T., Sato, Y., Nagayama, A., Tago, K., Hayatsu, M., Kikuchi, Y.: Infection dynamics of insecticide-degrading symbionts from soil to insects in response to insecticide spraying. ISME J. 12:909-920 (2018). DOI:10.1038/s41396-017-0021-9
  • Kinosita, Y., Kikuchi, Y., Mikami, N., Nakane, D., Nishizaka, T.: Unforeseen swimming and gliding mode of an insect gut symbiont, Burkholderia sp. RPE64, with wrapping of the flagella around its cell body. ISME. J. 12(3):838-848 (2018). DOI:10.1038/s41396-017-0010-z
  • Crüsemann, M., Reher, R., Schamari, I., Brachmann, AO., Ohbayashi, T., Kuschak, M., Malfacini, D., Seidinger, A., Pinto-Carbó, M., Richarz, R., Reuter, T., Kehraus, S., Hallab, A., Attwood, M., Schiöth, HB., Mergaert, P., Kikuchi, Y., Schäberle, TF., Kostenis, E., Wenzel, D., Müller, CE., Piel, J., Carlier, A., Eberl, L., König GM.: Heterologous Expression, Biosynthetic Studies, and Ecological Function of the Selective Gq-Signaling Inhibitor FR900359. Angew. Chem. Int. Ed. Engl. 57(3):836-840 (2018). DOI:10.1002/anie.201707996
  • Yasuno, R., Mitani, Y., Ohmiya, Y.: Effects of N-Glycosylation Deletions on Cypridina Luciferase Activity. Photochem. Photobiol. 94(2):338-342 (2018). DOI:10.1111/php.12847

2017

  • Mitani Y., Futahashi R., Liu Z., Liang X., Ohmiya Y.: Tibetan firefly luciferase with low temperature adaptation. Photochem. Photobiol. 93: 466-472 (2017). DOI:10.1111/php.12643
  • Kawasaki, K., Kamagata, Y.: Phosphate-Catalyzed Hydrogen Peroxide Formation from Agar, Gellan, and κ-Carrageenan and Recovery of Microbial Cultivability via Catalase and Pyruvate. Appl. Environ. Microbiol. 83(21):e01366-17 (2017). DOI:10.1128/AEM.01366-17
  • Park, KE., Jang, SH., Lee, J., Lee, SA., Kikuchi, Y., Seo, YS., Lee, BL.: The roles of antimicrobial peptide, rip-thanatin, in the midgut of Riptortus pedestris. Dev. Comp. Immunol. 78:83-90 (2018). DOI:10.1016/j.dci.2017.09.009
  • Amaral, DT., Mitani, Y., Oliveira, G., Ohmiya, Y., Viviani, VR.: Revisiting Coleoptera a + T-rich region: structural conservation, phylogenetic and phylogeographic approaches in mitochondrial control region of bioluminescent Elateridae species (Coleoptera). Mitochondrial DNA A DNA Mapp. Seq. Anal. 28(5):671-680 (2017). DOI:10.3109/24701394.2016.1174220
  • Mitani, Y., Oshima, Y., Mitsuda, N., Tomioka, A., Sukegawa, M., Fujita, M., Kaji, H., Ohmiya, Y.: Efficient production of glycosylated Cypridina luciferase using plant cells. Protein. Expr. Purif. 133:102-109 (2017). DOI:10.1016/j.pep.2017.03.008
  • Jia, H., Hanate, M., Aw, W., Itoh, H., Saito, K., Kobayashi, S., Hachimura, S., Fukuda, S., Tomita, M., Hasebe, Y., Kato, H.: Eggshell membrane powder ameliorates intestinal inflammation by facilitating the restitution of epithelial injury and alleviating microbial dysbiosis. Sci. Rep. 7: 43993 (2017). DOI:10.1038/srep43993
  • Masuda, Y*., Itoh, H.*, Shiratori, Y., Isobe, K., Otsuka, S., Senoo, K.: Predominant but previously-overlooked prokaryotic drivers of reductive nitrogen transformation in paddy soils, revealed by metatranscriptomics. Microbes Environ. 32:180-183 (2017). (*Equal contributions) DOI:10.1264/jsme2.ME16179
  • Mergaert, P., Kikuchi, Y., Shigenobu, S., Nowack, E.C.M.: Metabolic integration of bacterial endosymbionts through antimicrobial peptides. Trends Microbiol. 25:703-712 (2017). DOI:10.1016/j.tim.2017.04.007
  • Takeshita, K., Kikuchi, Y.: Riptortus pedestris and Burkholderia symbiont: an ideal model system for insect–microbe symbiotic associations. Res. Microbiol. 168:175-187 (2017). DOI:10.1016/j.resmic.2016.11.005
  • Igarashi, K., Kato, S.: Extracellular electron transfer in acetogenic bacteria and its application for conversion of carbon dioxide into organic compounds. Appl. Microbiol Biotechnol. 101:6301-6307 (2017). DOI:10.1007/s00253-017-8421-3
  • Kato, S., Kanata, Y., Kitagawa, W., Sone, T., Asano, K., Kamagata, Y.: Restoration of the growth of Escherichia coli under K+-deficient conditions by Cs+ incorporation via the K+ transporter Kup. Sci. Rep. 7:1965 (2017). DOI:10.1038/s41598-017-02024-4
  • Ishikawa, M., Tanaka, Y., Suzuki, R., Kimura, K., Tanaka, K., Kamiya, K., Ito, H., Kato, S., Kamachi, T., Hori, K., Nakanishi, S.: Real-time monitoring of intracellular redox changes in Methylococcus capsulatus (Bath) for efficient bioconversion of methane to methanol. Bioresour Technol. 241:1157-1161 (2017). DOI:10.1016/j.biortech.2017.05.107
  • Tanaka, K., Kaneko, M., Ishikawa, M., Kato, S., Ito, H., Kamachi, T., Kamiya, K., Nakanishi, S.: Specific interaction between redox phospholipid polymers and plastoquinone in photosynthetic electron transport chain. ChemPhysChem. 18:878-881 (2017). DOI:10.1002/cphc.201700065
  • Kato, S.: Influence of anode potentials on current generation and extracellular electron transfer paths of Geobacter species. Int. J. Mol. Sci. 18:108 (2017). DOI:10.3390/ijms18010108
  • Kaneko, M., Ishikawa, M., Song, J., Kato, S., Hashimoto, K., Nakanishi, S.: Cathodic supply of electrons to living microbial cells via cytocompatible redox-active polymers. Electrochem. Commun. 75:17-20 (2017). DOI:10.1016/j.elecom.2016.12.002
  • Itoh, H., Matsuura, Y., Hosokawa, T., Fukatsu T., Kikuchi, Y.: Obligate gut symbiotic association in the sloe bug Dolycoris baccarum (Hemiptera: Pentatomidae). Appl. Entomol. Zool. 52:51-59 (2017). DOI:10.1007/s13355-016-0453-0
  • Lee, J. B., Park, K. E., Lee, S. A., Jang, S. H., Eo, H. J., Jang, H. A., Kim, C. H., Ohbayashi, T., Matsuura, Y., Kikuchi, Y., Futahashi, R., Fukatsu, T., Lee, B. L.: Gut symbiotic bacteria stimulate insect growth and egg production by modulating hexamerin and vitellogenin gene expression. Dev. Comp. Immunol. 69:12-22 (2017). DOI:10.1016/j.dci.2016.11.019
  • Yoshimune, K., Yamamoto, M., Aoyagi, T., Yumoto, I.: High and rapid L-lactic acid production by alkaliphilic Enterococcus sp. by adding wheat bran hydrolysate. Ferment. Technol. 6:1 (2017). DOI:10.4172/2167-7972.1000138
  • Kuwabara, T., Igarashi, K.: Progeny production in the periplasm of Thermosipho globiformans. Extremophiles 21: 805-815 (2017) DOI:10.1007/s00792-017-0944-0
  • Okamoto, T., Aino, K., Narihiro, T., Matsuyama, H., Yumoto, I.: Analysis of microbiota involved in the aged natural fermentation. World J. Microbiol. Biotechnol. 33:70 (2017). DOI:10.1007/s11274-017-2238-1
  • Nishita, M., Hirota, K., Matsuyama H., Yumoto, I.: Development of media to accelerate the isolation of indigo-reducing bacteria, which are difficult to isolate using conventional media. World J. Microbiol. Biotechnol.33:133 (2017). DOI:10.1007/s11274-017-2300-z
  • Tanaka, M., Endo S., Kotake F, Al-saari, N., Amin, A.K.M.R, Feng, G., Mino, S., Doi, H. Ogura, Y., Hayashi T., Suda, W., Masahira Hattori, M., Yumoto I., Sawabe, T., Sawabe T., Araki, T.: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed. PLOS ONE journal.pone.0180053 June 29, (2017). DOI:10.1371/journal.pone.0180053
  • Hirota, K., Nishita, M., Matsuyama H., Yumoto, I.: Paralkalibacillus indicireducens gen., nov., sp. nov., an indigo-reducing obligate alkaliphile isolated from indigo fermentation liquor for dyeing. Int. J. Syst. Evol. Microbiol. in press (2017). DOI:10.1099/ijsem.0.002248

2016

  • Tamazawa S., Yamamoto K., Takasahi H., Mitani Y., Hanada S., Kamagata Y., Tamaki H.: In situ gene expression responsible for sulfide oxidation and CO2 fixation of an uncultured large sausage-shaped Aquificae bacterium in a sulfidic hot spring. Microbs Environ. 31-2:194-198 (2016). DOI:10.1264/jsme2.ME16013
  • Amaral D., Mitani Y., Ohmiya Y., Viviani VR.: Organization and comparative analysis of the mitochondrial genomes of bioluminescent Elateroidea (Coleoptera: Polyphaga). Gene 586:254-262 (2016). 10.1016/j.gene.2016.04.009
  • Kato, S., Goya, E., Tanaka, M., Kitagawa, W., Kikuchi, Y., Asano, K., Kamagata, Y.: Enrichment and isolation of Flavobacterium strains with tolerance to high concentrations of cesium ion. Sci. Rep. 6:20041 (2016). DOI:10.1038/srep20041
  • Kato, S.: Microbial extracellular electron transfer and its relevance to iron corrosion. Microbial Biotechnol. 9:141-148 (2016). DOI:10.1111/1751-7915.12340
  • Terashima, M., Yama, A., Sato, M., Yumoto, I., Kamagata, Y., Kato, S.: Culture-dependent and -independent identification of polyphosphate-accumulating Dechloromonas spp. predominating in a full-scale oxidation ditch wastewater treatment plant. Microbes Environ. 31:449-455 (2016). DOI:10.1264/jsme2.ME16097
  • Song, J., Sasaki, D., Sasaki, K., Kato, S., Kondo, A., Hashimoto, K., Nakanishi, S.: Comprehensive metabolomic analyses of anode-respiring Geobacter sulfurreducens cells: the impact of anode-respiration activity on intracellular metabolite levels. Process Biochem. 51:34-38 (2016). DOI:10.1016/j.procbio.2015.11.012
  • Hosokawa, T., Matsuura, Y., Kikuchi, Y., Fukatsu, T.: Recurrent evolution of gut symbiotic bacteria in pentatomid stinkbugs. Zoological Lett. 2:24 (2016). DOI:10.1186/s40851-016-0061-4
  • Kikuchi, Y., Tada, A., Musolin, D. L., Hari, N., Hosokawa, T., Fujisaki, K., Fukatsu, T.: Collapse of Insect gut symbiosis under simulated Climate Change. mBio 7:e01578-01516. DOI:10.1128/mBio.01578-16
  • Kuechler, S. M., Matsuura, Y., Dettner, K., Kikuchi, Y.: Phylogenetically diverse Burkholderia associated with midgut crypts of spurge bugs, Dicranocephalus spp. (Heteroptera: Stenocephalidae). Microbes Environ. 31:145-153 (2016). DOI:10.1264/jsme2.ME16042
  • Sudakaran, S., Retz, F., Kikuchi, Y., Kost, C., Kaltenpoth, M.: Evolutionary transition in symbiotic syndromes enabled diversification of phytophagous insects on an imbalanced diet. ISME J. 9: 2587-2604 (2016). DOI:10.1038/ismej.2015.75
  • Goto, T., Hirabayashi, T., Morimoto, H., Yamazaki, K., Inoue, N., Matsuyama, H., Yumoto, I.: Contribution of intracellular negative ion capacity to Donnan effect across the membrane in alkaliphilic Bacillus spp. J. Bioenerg. Biomembr. 48:87-96 (2016). DOI:10.1007/s10863-015-9641-9
  • Hirota, K., Yokota, Y., Sekimura, T., Uchiumi, H., Guo, Y., Ohta, H., Yumoto, I.: Bacterial communities in different locations, seasons and segments of a dairy wastewater treatment system consisting of six segments. J. Environ. Sci. 45:109-115 (2016). DOI:10.1016/j.jes.2015.09.025
  • Hirota, K., Aino, K, Yumoto, I.: Fermentibacillus polygoni gen. nov., sp. nov., an alkaliphile that reduces indigo dye. Int. J. Syst. Evol. Microbiol. 66:2247-2253 (2016). DOI:10.1099/ijsem.0.001015
  • Sae-Tang, P., Hihara, Y., Yumoto, I., Orikasa, Y., Okuyama, H., Nishiyama, Y.: Overexpression superoxide dismutase and catalase act synergistically to protect the repair of PS II during photoinhibition in Synechococcus elongates PCC 7942. Plant Cell Physiol. 57:1899-1907 (2016). DOI:10.1093/pcp/pcw110
  • Hirota, K., Okanoto, T., Matsuyama, H., Yumoto, I.: Polygonibacillus indicireducens gen. nov., sp. nov., an indigo-reducing and obligate alkaliphile isolated from indigo fermentation liquor for dyeing. Int. J. Syst. Evol. Microbiol. 66:2247-2253 (2016). DOI:10.1099/ijsem.0.001405
  • Igarashi, K., Yamamura, Y., Kuwabara, T.: Natural synthesis of bioactive greigite by solid-gas reactions. Geochim. Cosmochim. Acta 191:47-57 (2016). DOI:10.1016/j.gca.2016.07.005
  • Igarashi, K., Kuwabara, T.: Hydrogen sulfide-free methane production by fermenter–methanogen syntrophy using dacite pumice under aerobic gas phase. Energy & Fuels 30:4945-4950 (2016) DOI:10.1021/acs.energyfuels.6b00494

2015

  • Kannno M., Tamaki H., Mitani Y., Kimura N., Hanada S., Kamagata Y.: pH-Induced change in cell susceptibility to butanol in a high butanol-tolerant bacterium, Enterococcus faecalis strain CM4A. Biotehnol. Biofuel. 8-69 (2015). DOI:10.1186/s13068-015-0251-x
  • Kouzuma, A., Kato, S., Watanabe, K.: Microbial interspecies interactions: recent findings in syntrophic consortia. Front. Microbiol. 6:477 (2015). DOI:10.3389/fmicb.2015.00477
  • Ohbayashi, T., Takeshita, K., Kitagawa, W., Nikoh, N., Koga, R., Meng, X. Y., Tago, K., Hori, T., Hayatsu, M., Asano, K., Kamagata, Y., Lee, B. L., Fukatsu, T., Kikuchi, Y.: Insect’s intestinal organ for symbiont sorting. Proc. Natl. Acad. Sci. USA. 112:5179-5188 (2015). DOI:10.1073/pnas.1511454112
  • Lee, J. B., Byeon, J. H., Jang, H. A., Kim, J. K., Yoo, J. W., Kikuchi, Y., Lee, B. L.: Bacterial cell motility of Burkholderia gut symbiont is required to colonize the insect gut. FEBS Lett. 589:2784-2790. (2015). DOI:10.1016/j.febslet.2015.08.022
  • Matsuura, Y., Kikuchi Y., Miura. T., Fukatsu, T.: Ultrabithorax is essential for bacteriocyte development. Proc. Natl. Acad. Sci. USA. 112: 9376-9381 (2015). DOI:10.1073/pnas.1503371112
  • Hosokawa, T., Kaiwa N, Matsuura, Y., Kikuchi, Y., Fukatsu, T.: Infection prevalence of Sodalis symbionts among stinkbugs. Zoological Lett. 1:5 (2015). DOI:10.1186/s40851-014-0009-5
  • Takeshita, K., Matsuura, Y., Itoh, H., Navarro, R., Hori, T., Sone, T., Kamagata, Y., Mergaert, P., Kikuchi, Y.: Burkholderia of plant-beneficial group are symbiotically associated with bordered plant bugs (Heteroptera: Pyrrhocoroidea: Largidae). Microbes Environ. 30:321-329 (2015). DOI:10.1264/jsme2.ME15153
  • Tago, K., Kikuchi, Y., Nakaoka, S., Katsuyama, C., Hayatsu, M.: Insecticide applications to soil contribute to the development of Burkholderia mediating insecticide resistance in stinkbugs. Mol. Ecol. 24: 3766-3778 (2015). DOI:10.1111/mec.13265
  • Navarro, R. R., Aoyagi, T., Kimura, M., Itoh, H., Sato, Y., Kikuchi, Y., Ogata, A., Hori, T.: High resolution dynamics of microbial communities during dissimilatory selenate reduction in an anoxic soil. Environ. Sci. Technol. 49: 7684–7691 (2015). DOI:10.1021/es505210p
  • Aoyagi, T., Hanada, S., Itoh, H., Sato, Y., Ogata, A., Friedrich, M. W., Kikuchi, Y., Hori, T.: Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients. Environ. Microbiol. Rep. 7: 282-287 (2015). DOI:10.1111/1758-2229.12243
  • Tago, K., Okubo, T., Itoh, H., Kikuchi, Y., Hori, T., Sato, Y., Nagayama, A., Hayashi, K., Ikeda, S., Hayatsu, M.: Insecticide-degrading Burkholderia symbionts of the stinkbug naturally occupy various environments of sugarcane fields in a southeast island of Japan. Microbs Environ. 30: 29-36 (2015). DOI:10.1264/jsme2.ME14124
  • Tago, K., Okubo, T., Shimomura, Y., Kikuchi, Y., Hori, T., Nagayama, A., Hayatsu, M.: Environmental factors shaping the community structure of ammonia-oxidizing bacteria and archaea in sugarcane field soil. Microbs Environ. 30: 21-28 (2015). DOI:10.1264/jsme2.ME14137
  • Kato S., Yumoto I., Kamagata Y.: Isolation of acetogenic bacteria that induce biocorrosion by utilizing metallic iron as the sole electron donor. Appl. Environ. Microbiol. 81:67-73 (2015). DOI:10.1128/AEM.02767-14
  • Kato S.: Biotechnological aspects of microbial extracellular electron transfer. Microbes Environ. 30:133-139 (2015). DOI:10.1264/jsme2.ME15028
  • Yamada C., Kato S., Ueno Y., Ishii M., Igarashi Y.: Conductive iron oxides accelerate thermophilic methanogenesis from acetate and propionate. J. Biosci. Biotechnol. 119:678-682 (2015). DOI:10.1016/j.jbiosc.2014.11.001
  • Nishio K., Pornpitra T., Izawa S., Nishiwaki-Ohkawa T., Kato S., Hashimoto K., Nakanishi S.: Electrochemical detection of circadian redox rhythm in cyanobacterial cells via extracellular electron transfer. Plant Cell Physiol. 56:1053-1058 (2015). DOI:10.1093/pcp/pcv066
  • Aoyagi T., Kimura M., Yamada N., Navarro R.R., Itoh H., Ogata A., Sakoda A., Katayama Y., Takasaki M., Hori T.: Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments. Front. Microbiol. 6:426 (2015). DOI:10.3389/fmicb.2015.00426
  • Hori T., Aoyagi T., Itoh H., Narihiro T., Oikawa A., Suzuki K., Ogata A., Friedrich M.W., Conrad R., Kamagata Y.: Isolation of microorganisms involved in reduction of crystalline iron(III) oxides in natural environments. Front. Microbiol. 6:386 (2015). DOI:10.3389/fmicb.2015.00386
  • Hanaoka, Y., Yumoto, I.: Manipulation of culture condition for extensive extracellular catalase production by Exiguobacterium oxidotolerans T-2-2T. Ann. Microbiol. 65: 1183-1187 (2015). DOI:10.1007/s13213-014-0943-7
  • Matsuyama, H., Minami, H., Sakaki, T., Kasahara, H., Watanabe, A., Onoda, T., Hirota, K., Yumoto, I.: Psychrobacter oceani sp. nov., isolated from marine sediment. Int. J. Syst. Evol. Microbiol. 65:1450-1455 (2015). DOI:10.1099/ijs.0.000118
  • Matsuyama, H., Minami, H., Sakaki, T., Kasahara, H., Hirota, K., Yumoto, I.: Alteromonas gracilis sp. nov., a marine polysaccharide-producing bacterium. Int. J. Syst. Evol. Microbiol. 65:1498-1503 (2015). DOI:10.1099/ijs.0.000127

2. 総説・著書 (2014年以降)

2019年

  • 青柳智、真弓大介、菊池義智、尾形敦、羽部浩、堀知行、森下史郎、杉山豊、市川大輔、村岡健次: 高感度Stable Isotope Probing (SIP)による廃水処理槽内の1,4-ジオキサン分解菌の同定. 環境と測定技術. 46(2): pp 17-27 (2019).

2018年

  • 三谷恭雄: スマートセルインダストリー, トランスクリプトーム解析技術. (シーエムシー出版) (2018).

2017年

  • 玉木秀幸, 川崎公誠, 鎌形洋一: 古典的手法の再考がもたらす難培養・未知微生物の培養化. バイオサイエンスとインダストリー. 75: pp 310-314 (2017).
  • 五十嵐健輔: ナノ炭素素材グラフェンがつくる明るい未来. 生物工学会誌. 95: pp 14 (2017).

2016年

  • 伊藤英臣: 土壌微生物が斑点米カメムシを育む. 土と微生物 70: pp 87 (2016).
  • 加藤創一郎: 電気を食べる微生物が引き起こす鉄腐食. バイオサイエンスとインダストリー 74: pp 522-523 (2016).
  • 加藤創一郎: 酸素の要らない「酢酸生成菌」の世界. 生物工学会誌. 94: pp 744 (2016).
  • 星野保, 辻雅晴, 横田祐司, 工藤栄, 内海洋, 湯本勲: 南極産酵母の環境適応機構の解明とその産業利用. 生物工学会誌 94: (6) pp 329-331 (2016).
  • Yumoto, I.: How alkaliphiles produce energy to sustain their life under extremely low proton concentrations. Atlas of Science June 27 (2016).

2015年

  • 加藤創一郎: 微生物間の電子移動に基づく共生. 難培養微生物研究の最新技術III (シーエムシー出版)pp 155-162 (2015).
  • 伊藤英臣, 菊池義智: 昆虫に新機能を賦与する微生物. 難培養微生物研究の最新技術Ⅲ (シーエムシー出版) pp 95-10 (2015).
  • 伊藤英臣: 昆虫と土壌微生物の共生:農業害虫カメムシ-土壌間の殺虫剤分解菌の動態解明. 日本土壌壌微生物学会誌. 69(1): pp 34-38 (2015).
  • Matsuno, T., Yumoto, I.: Bioenergetic and role of soluble cytochromes c for alkaline adaptation in Gram-negative alkaliphilic Pseudomonas. BioMed Res. Int. 2015 847945 (2015).
  • 湯本 勳、松野敏英: 好アルカリ性細菌のエネルギー代謝機構から見たチトクロムcの多機能、 化学と生物 53: pp 156-163 (2015).

2014年

  • 加藤創一郎: 鉄で呼吸する. 環境と微生物の事典 (朝倉書店) pp 80-81 (2014).
  • 加藤創一郎: 細胞外電子伝達:固体を呼吸基質とする微生物たち. 微生物生態学会和文誌. 29: pp.65-75 (2014).
  • Yumoto, I., K. Hirota, and K. Nakajima: Alkalibacterium. In Lactic Acid Bacteria – Biodiversity and Taxonomy. Eds, Holzapfel W and Wood BB, Blackwell, UK, pp 147-158 (2014).

3. 特許 (2011年以降)

  • 近江谷克裕、光田展隆、三谷恭雄、大島良美: ウミホタルルシフェラーゼ生産法. 特6386029 (2018.8)
  • 近江谷克裕、三谷恭雄、安野理恵: 発光酵素タンパク質. 特6441534 (2018.11)
  • 湯本勳、広田菊江、本村信人: 有機物分解用複合菌、有機性廃棄物処理法、有機肥料製造方法、および菌床. 特6074673 (2017.1)
  • 星野保, 横田祐司, 辻雅晴, 湯本勲, 工藤栄: 乳脂肪分解能を有する南極産担子菌酵母及びその利用方法.> 特5867954 (2016.1)
  • Kawasaki, K., Morita, Y., Ohgiya, S., Ohmiya, Y., Ohyama, H.: Mutant luciferase. 2452457(2011 英国特許)
  • 橋本和仁中村龍平甲斐文祥渡邉一哉加藤創一郎: Microbial fuel cell, EP2270915-A1, 2011.1.5 [国外特許 登録]

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