Plant Gene Regulation Research Group
publications

Original papers

2023

  • Maeda, T., Sugano, S. S., Shirakawa, M., Sagara, M., Ito, T., Kondo, S., Nagano, A. J. Single-cell RNA Sequencing of Arabidopsis Leaf Tissues Identifies Multiple Specialized Cell Types: Idioblast Myrosin Cells and Potential Glucosinolate-producing Cells. Plant Cell Physiol. 2023 Mar 64(2):234-247.
  • Asaoka, M., Sakamoto, S., Gunji, S., Mitsuda, N., Tsukaya, H., Sawa, S., Hamant, O., Ferjani, A. Contribution of vasculature to stem integrity in Arabidopsis thaliana. DEVELOPMENT. 2023 Feb 15;150(3):dev201156.
  • Takahara, M., Tsugawa, S., Sakamoto, S., Demura, T., Nakata, MT. Pulvinar Slits: Cellulose-deficient and De-Methyl-Esterified Pectin-Rich Structures in a Legume Motor. Cell Plant Physiol. 2023 Feb 150(3):dev201156.
  • Kobayashi, H., Murakami, K., Sugano, SS., Tamura, K., Oka, Y., Matsushita, T., Shimada, T. Comprehensive analysis of peptide-coding genes and initial characterization of an LRR-only microprotein in Marchantia polymorpha. FRONT PLANT SCI. 2023 Jan 13:1051017.

2022

  • Takasaki, H., Ikeda, M., Hasegawa, R., Yilin, Z., Sakamoto, S., Maruyama, D., Mitsuda, N., Kinoshita, T., Ohme-Takagi, M. Elongation of Siliques Without Pollination 3 Regulates Nutrient Flow Necessary for Embryogenesis. Plant Cell Physiol. 2022 Oct 20:pcac151.
  • Zhang, J., Liu, Z., Sakamoto, S., Mitsuda, N., Ren, A., Persson, S., Zhang, D. ETHYLENE RESPONSE FACTOR 34 promotes secondary cell wall thickening and strength of rice peduncles. Plant Physiol. 2022 Oct 27;190(3):1806-1820.
  • Sakamoto, S., Nomura, T., Kato, Y., Ogita, S., Mitsuda, N. High-transcriptional activation ability of bamboo SECONDARY WALL NAC transcription factors is derived from C-terminal domain. Plant Biotechnol (Tokyo). 2022 Sep 25;39(3):229-240.
  • Chung, K., Demianski, AJ., Harrison, GA., Laurie-Berry, N., Mitsuda, N., Kunkel, BN. Jasmonate Hypersensitive 3 negatively regulates both jasmonate and ethylene-mediated responses in Arabidopsis. J Exp Bot. 2022 Aug 11;73(14):5067-5083.
  • Hasegawa, R., Arakawa, T., Fujita, K., Tanaka, Y., Ookawa, Z., Sakamoto, S., Takasaki, H., Ikeda, M., Yamagami, A., Mitsuda, N., Nakano, T., Ohme-Takagi, M. Arabidopsis homeobox-leucine zipper transcription factor BRASSINOSTEROID-RELATED HOMEOBOX 3 regulates leaf greenness by suppressing BR signaling. Plant Biotechnol (Tokyo). 2022 Jun 25;39(2):209-214.
  • Hasegawa, R., Fujita, K., Tanaka, Y., Takasaki, H., Ikeda, M., Yamagami, A., Mitsuda, N., Nakano, T., Ohme-Takagi, M. Arabidopsis zinc finger homeodomain transcription factor BRASSINOSTEROID-RELATED HOMEOBOX 2 acts as a positive regulator of brassinosteroid response. lant Biotechnol (Tokyo). 2022 Jun 25;39(2):185-189.
  • Huang, W., Sakuma, S., Tottori, N., Sugano, S. S., Yamanishi, Y. Viscosity-aided electromechanical poration of cells for transfecting molecules. Lab on a Chip 22. 2022.
  • Yokomori, M., Suzuki, H., Nakamura, A., Sugano, S.S., Tagawa, M. DNA-functionalized colloidal crystals for macromolecular encapsulation. Soft Matter 18: 6954-6964. 2022.
  • Kajino, T., Yamaguchi, M., Oshima, Y., Nakamura, A., Narushima, J., Yaguchi, Y., Yotsui, I., Sakata, Y., Taji, T. KLU/CYP78A5, a Cytochrome P450 Monooxygenase Identified via Fox Hunting, Contributes to Cuticle Biosynthesis and Improves Various Abiotic Stress Tolerances. Front Plant Sci., 13: 904121. 2022.
  • Fukuda, N., Oshima, Y., Ariga, H., Kajino, T., Koyama, T., Yaguchi, Y., Tanaka, K., Yotsui, I., Sakata, Y., Taji, T. ECERIFERUM 10 Encoding an Enoyl-CoA Reductase Plays a Crucial Role in Osmotolerance and Cuticular Wax Loading in Arabidopsis. Plant Sci., 13:898317. 2022.
  • Ezura, K., Nakamura A, Mitsuda N. Genome-wide characterization of the TALE homeodomain family and the KNOX-BLH interaction network in tomato. Plant Mol Biol. 109: 799-821. 2022.
  • Sekiguchi, N., Sasaki, K., Oshima, Y., Mitsuda, N. Ectopic expression of AtNF-YA6-VP16 in petals results in a novel petal phenotype in Torenia fournieri. Planta 255: 105. 2022.
  • Hu, S., Kamimura, N., Sakamoto, S., Nagano, S., Takata, N., Liu, S., Goeminne, G., Vanholme, R., Uesugi, M., Yamamoto, M., Hishiyama, S., Kim, H., Boerjan, W., Ralph, J., Masai, E., Mitsuda, N., Kajita, S. Rerouting of the lignin biosynthetic pathway by inhibition of cytosolic shikimate recycling in transgenic hybrid aspen. Plant J. 2022. doi: 10.1111/tpj.15674.
  • Ikeuchi, M., Iwase, A., Ito, T., Tanaka, H., Favero, DS., Kawamura, A., Sakamoto, S., Wakazaki, M., Tameshige, T., Fujii, H., Hashimoto, N., Suzuki, T., Hotta, K., Toyooka, K., Mitsuda, N., Sugimoto, K. Wound-inducible WUSCHEL RELATED HOMEOBOX 13 is required for callus growth and organ reconnection. Plant Physiol., 188: 425-441. 2022.

2021

  • Gao, R.F., Wang, J.Y., Liu, K.W., Yoshida, K., Hsiao, Y.Y., Shi, Y.X., Tsai, K.C., Chen, Y.Y., Mitsuda, N., Liang, C.K., Wang, Z.W., Wang, Y., Zhang, D.Y., Huang. L., Zhao, X., Zhong, W.Y., Cheng, Y.H., Jiang, Z.D., Li, M.H., Sun, W.H., Yu, X., Hu, W., Zhou, Z., Zhou, Yeh, C.M., Katoh, K., Tsai, W.C., Liu, Z.J., Martin, F., Zhang, G.M. Comparative analysis of Phytophthora genomes reveals oomycete pathogenesis in crops. Heliyon 7: e06317. 2020.
  • Hiroguchi, A., Sakamoto, S., Mitsuda, N., Miwa, K. Golgi-localized TMN1/EMP12 functions in the deposition of rhamnogalacturonan II and I for cell growth in Arabidopsis. J. Exp. Bot. 72: 3611-3629. 2021.
  • Ikeda, M., Mitsuda, N., Ishizuka, T., Satoh, M., Ohme-Takagi, M. The CIB1 Transcription Factor Regulates Light- and Heat-inducible Cell Elongation via a Two-step HLH/bHLH System. J. Exp. Bot. 72: 1795-1808. 2021.

2020

  • Tonosaki, K., Ono, A., Kunisada, M., Nishino, M., Nagata, H., Sakamoto, S., Kijima, S.T., Furuumi, H., Nonomura, K., Sato, Y., Ohme-Takagi, M., Endo, M., Comai, L., Hatakeyama, K., Kawakatsu, T., Kinoshita, T. Mutation of the imprinted gene OsEMF2a induces autonomous endosperm development and delayed cellularization in rice. Plant Cell. 33: 85-103. 2020.
  • Sakoda, K., Yamori, W., Shimada, T., Sugano, S.S., Hara-Nishimura, I., Tanaka, Y. Higher Stomatal density improves photosynthetic induction and biomass production in Arabidopsis under fluctuating light. Front Plant Sci. 11: 1609. 2020.
  • Ikeda, M., Takahashi, M., Fujiwara, S., Mitsuda, N., Ohme-Takagi, M. Improving the efficiency of adventitious shoot induction and somatic embryogenesis via modification of WUSCHEL and LEAFY COTYLEDON 1. Plants 9: 1434. 2020.
  • Kitomi, Y., Hanzawa, E., Kuya, N., Inoue, H., Hara, N., Kawai, S., Kanno, N., Endo, M., Sugimoto, K., Yamazaki, T., Sakamoto, S., Sentoku, N., Wu, J., Kanno, H., Mitsuda, N., Toriyama, K., Sato, T., Uga Y. Root angle modifications by the DRO1 homolog improve rice yields in saline paddy fields. Proc. Natl. Acad. Sci. USA. 117: 21242-21250. 2020.
  • Nabuqi, Nuoendagula, Wu, S., Takata, N., Sakamoto, S., Yamamoto, M., Uesugi, M., Dejardin, A., Pilate, G., Taniguchi, T., Mitsuda, N., Kajita, S. Simultaneous manipulation of lignin structure and secondary cell wall formation in transgenic poplar. J. Wood Sci. 66: 56. 2020.
  • Nakayama, S., Sugano, S.S., Hirokawa, H., Mori, I.C., Daimon, H., Kimura, S., Fukao, Y. Manganese treatment alleviates zinc deficiency symptoms in Arabidopsis deedlings. Plant Cell Physiol.61: 1711-1723. 2020.
  • Nagahage, I.S.P., Sakamoto, S., Nagano, M., Ishikawa, T., Mitsuda, N., Kawai-Yamada, M., Yamaguchi, M. An Arabidopsis NAC domain transcription factor, ATAF2, promotes age-dependent and dark-induced leaf senescence. Physiol. Plant. 170: 299-308. 2020.
  • Sakamoto, S., Kamimura, N., Tokue, Y., Nakata, M.T., Yamamoto, M., Hu, S., Masai, E., Mitsuda, N., Kajita, S. Identification of enzymatic genes with the potential to reduce biomass recalcitrance through lignin manipulation in Arabidopsis. Biotech. Biofuels 13: 97. 2020.
  • Qin, W., Yin, Q., Chen, J., Zhao, X., Yue, F., He, J., Yang, L., Liu, L., Zeng, Q., Lu, F., Mitsuda, N., Ohme-Takagi, M., Wu, A.M. The Class II KNOX transcription factors KNAT3 and KNAT7 synergistically regulate monolignol biosynthesis in Arabidopsis. J Exp Bot. 71: 5469-5483. 2020.
  • Ishida, T., Suzuki, R., Nakagami, S., Kuroha, T., Sakamoto, S., Nakata, M.T., Yokoyama, R., Kimura, S., Mitsuda, N., Nishitani, K., Sawa, S. Root-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots. J. Plant Res. 133: 419-428. 2020.
  • Yamamoto, M., Tomiyama, H., Koyama, A., Okuizumi, H., Liu, S., Vanholme, R., Goeminne, G., Hirai, Y., Shi, H., Nuoendagula, Takata, N., Ikeda, T., Uesugi, M., Kim, H., Sakamoto, S., Mitsuda, N., Boerjan, W.A., Ralph, J., Kajita, S. A. Century-old mystery unveiled: Sekizaisou is a natural lignin mutant. Plant Physiol., 182: 1821-1828. 2020.
  • Yeh, C.M., Kobayashi, K., Fujii, S., Fukaki, H., Mitsuda, N. Ohme-Takagi, M. Blue Light Regulates Phosphate Deficiency-Dependent Primary Root Growth Inhibition in Arabidopsis. Front. Plant Sci. 10: 1803. 2020.
  • Sakamoto, S., Matsui, K., Oshima, Y., Mitsuda, N. Efficient transient gene expression system using buckwheat hypocotyl protoplasts for large-scale experiments. Breeding Sci. 70: 128-134. 2020.

2019

  • Sera, Y., Hanamata, S., Sakamoto, S., Ono, S., Kaneko, K., Mitsui, Y., Koyano, T., Fujita, N., Sasou, A., Masumura, T., Saji, H., Nonomura, KI., Mitsuda, N., Mitsui, T., Kurusu, T., Kuchitsu, K. Essential roles of autophagy in metabolic regulation in endosperm development during rice seed maturation. Sci. Rep. 9, 18544. 2019.
  • Akiyoshi, N., Nakano, Y., Sano, R., Kunigita, Y., Ohtani, M., Demura, T. Involvement of VNS NAC-domain transcription factors in tracheid formation in Pinus taeda. Tree Physiol., 2019. in press.
  • Yoshida, K., Sakamoto, S., Mitsuda, N. Tensile testing assay for the measurement of tissue stiffness in Arabidopsis inflorescence stem. Bio-protocol 9, e3327, 2019.
  • Hieno, A., Naznin, HA., Inaba-Hasegawa, K., Yokogawa, T., Hayami, N., Nomoto, M., Tada, Y., Yokogawa, T., Higuchi-Takeuchi, M., Hanada, K., Matsui, M., Ikeda, Y., Hojo, Y., Hirayama, T., Kusunoki, K., Koyama, H., Mitsuda, N., Yamamoto, YY. Transcriptome analysis and identification of a transcriptional regulatory network in the response to H2O2. Plant Physiol., 180, 1629-1646. 2019.
  • Takata, N., Awano, T., Nakata M.T., Sano, Y., Sakamoto, S., Mitsuda, N., Taniguchi, T. Populus NST/SND orthologs are key regulators of secondary cell wall formation in wood fibers, phloem fibers and xylem ray parenchyma cells Tree Physiol., 39, 514-525. 2019.
  • Huang, P.Y., Zhang, J., Jiang, B., Chan, C., Yu, J.H., Lu, Y.P., Chung, K., Zimmerli, L. NINJA-Associated ERF19 Negatively Regulates Arabidopsis Pattern-Triggered Immunity. J. Exp. Bot., 70: 1033-1047. 2019.

2018

  • Sato,H., Takasaki, H., Takahashi, F., Suzuki, T., Iuchi, S., Mitsuda, N., Ohme-Takagi, M., Ikeda, M., Seo, M., Yamaguchi-Shinozaki, K., Shinozaki, K. Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3 gene during dehydration stress. Proc. Natl. Acad. Sci. U.S.A., 115, E11178-E11187. 2018.
  • Park, B.S., Yao, T., Seo, J. S., Wong, E. C. C., Mitsuda, N., Huang, C. H., Chua,N. H. Arabidopsis NITROGEN LIMITATION ADAPTATION regulates ORE1 homeostasis during senescence induced by nitrogen deficiency. Nature Plants 4: 898-903. 2018.
  • Sakamoto, S., Somssich, M., Nakata, M.T., Unda, F., Atsuzawa, K., Kaneko, Y., Wang, T., Bagman, A. M., Gaudinier, A., Yoshida, K., Brady, S. M., Mansfield, S. D., Persson, S., Mitsuda, N. Complete substitution of a secondary cell wall with a primary cell wall in Arabidopsis. Nature Plants 4, 777-783. 2018.
  • Mitani, Y., Yasuno, R., Isaka, M., Mitsuda, N., Futahashi, R., Kamagata, Y., Ohmiya, Y. Novel gene encoding a unique luciferase from the fireworm Odontsyllis undecimdonta. Sci. Rep. 8: 12789. 2018.
  • Matsui, K., Oshima, Y., Mitsuda, N., Sakamoto, S., Nishiba, Y., Walker, A. R., Ohme-Takagi, M., Robinson, S. P., Yasui, Y., Mori, M., Takami, H. Buckwheat R2R3 MYB transcription factor FeMYBF1 regulates flavonol biosynthesis. Plant Sci. 274: 466-475. 2018.
  • Kuroha, T., Nagai, K., Gamuyao, R., Wang, D. R., Furuta, T., Nakamori, M., Kitaoka, T., Adachi, K., Minami, A., Mori, Y., Mashiguchi, K., Seto, Y., Yamaguchi, S., Kojima, M., Sakakibara, H., Wu, J., Ebana, K., Mitsuda, N., Ohme-Takagi, M., Yanagisawa, S., Yamasaki, M., Yokoyama, R., Nishitani, K., Mochizuki, T., Tamiya, G., McCouch, S. R., and Ashikari, M. An Ethylene-Gibberellin Signaling Underlies Adaptation of Rice to Periodic Flooding. Science, 361: 181-186. 2018.
  • Nakata, M. T., Tameshige, T., Takahara, M., Mitsuda, N., Okada, K. The functional balance between the WUSCHEL-RELATED HOMEOBOX1 gene and the phytohormone auxin is a key factor for cell proliferation in Arabidopsis seedlings. Plant Biotechnol., 35: 141-154. 2018.
  • Sanagi, M., Lu, Y., Aoyama, S., Morita, Y., Mitsuda, N., Ikeda, M., Ohme-Takagi, M., Sato, M., Yamaguchi, J. Sugar-responsive transcription factor bZIP3 affects leaf shape in Arabidopsis plant. Plant Biotechnol., 35: 167-170. 2018.
  • Nakata, M.T., Takahara, M., Sakamoto, S., Yoshida, K., Mitsuda, N. High-throughput analysis of Arabidopsis stem vibrations to identify mutants with altered mechanical properties. Front. Plant Sci., 9: 780. 2018.
  • Chuang, Y.C., Hung, Y.C., Hsu, C.Y., Yeh, C.M., Mitsuda, N., Ohme-Takagi, M., Tsai, W.C., Chen, W.H., Chen, H.H. A dual repeat cis-element determines expression of GERANYL DIPHOSPHATE SYNTHASE for monoterpene production in Phalaenopsis orchids. Front. Plant Sci., 9: 765. 2018.
  • Segami, S., Tomoyama, T., Sakamoto, S., Gunji, S., Fukuda, M., Kinoshita, S., Mitsuda, N., Ferjani, A., Maeshima, M. Vacuolar H+-pyrophosphatase and cytosolic soluble pyrophosphatases cooperatively regulate pyrophosphate levels in Arabidopsis thaliana. Plant Cell, 30: 1040-1061. 2018.
  • Kiba, T., Inaba, J., Kudo, T., Ueda, N., Konishi, M., Mitsuda, N., Takiguchi, Y., Kondou, Y., Yoshizumi, T., Ohme-Takagi, M., Matsui, M., Yano, K., Yanagisawa, S., Sakakibara, H. Repression of Nitrogen-Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily. Plant Cell, 30: 925-945. 2018.
  • Nuoendagula, Tsuji, Y., Takata, N., Sakamoto, S., Nakagawa-Izumi, A., Taniguchi, T., Ralph, J., Mitsuda, N., Kajita, S. Change in lignin structure, but not in lignin content, in transgenic poplar overexpressing the rice master regulator of secondary cell wall biosynthesis. Physiol. Plant, 163: 170-182. 2018.
  • Yokotani, N., Shikata, M., Ichikawa, H., Mitsuda, N., Ohme-Takagi, M., Minami, E., Nishizawa, Y. OsWRKY24 is a blast-disease responsive transcription factor playing a role in rice disease resistance. J. General Plant Pathol. 84: 85-91. 2018.
  • Tamura, K., Yoshida, K., Hiraoka, Y., Sakaguchi, D., Mochida, K., Kojoma, M., Mitsuda, N., Saito, K., Muranaka, T., Seki, H. The basic helix-loop-helix transcription factor GubHLH3 positively regulates soyasaponin biosynthetic genes in Glycyrrhiza uralensis. Plant Cell Physiol. 59: 778-791. 2018.
  • Sato, H., Sakamoto, S., Mitsuda, N., Ohme-Takagi, M., Takamizo, T. Improvement of cell wall digestibility in tall fescue by Oryza sativa SECONDARY WALL NAC DOMAIN PROTEIN2 chimeric repressor. Mol. Breeding 38: 36. 2018.

2017

  • Nakano, Y., Naito Y., Nakano, T., Ohtsuki, N., Suzuki, K. NSR1/MYR2 is a negative regulator of ASN1 expression and its possible involvement in regulation of nitrogen reutilization in Arabidopsis. Plant Sci. 263: 219-225. 2017.
  • Shin, J.M., Chung, K.M., Sakamoto, S., Kojima, S., Yeh, C.M., Ikeda, M., Mitsuda, N., Ohme-Takagi, M. The chimeric repressor for the GATA4 transcription factor improves tolerance to nitrogen deficiency in Arabidopsis. Plant Biotechnol. 34: 151-158. 2017.
  • Zhang, G.Q., Liu, K.W., Li, Z., Lohaus, R., Hsiao, Y.Y., Niu, S.C., Wang, J.Y., Lin, Y.C., Xu, Q., Chen, L.J., Yoshida, K., Fujiwara, S., Wang, Z.W., Zhang, Y.Q., Mitsuda, N., Wang, M.N., Liu, G.H., Pecoraro, L., Huang, H.X., Xiao, X.J., Lin, M., Wu, X.Y., Wu, W.L., Chen, Y.Y., Chang, S.B., Sakamoto, S., Ohme-Takagi, M., Yagi, M., Zeng, S.J., Shen, C.Y., Yeh, C.M., Luo, Y.B., Tsai, W.C., Van de Peer, Y., Liu, Z.J. The Apostasia genome and the evolution of orchids. Nature 549: 379-383. 2017.
  • Takata, N., Sakamoto, S., Mitsuda, N., and Taniguchi, T. Arabidopsis NST3/SND1 promoter is active in secondary woody tissue in poplar. J Wood Sci. 63: 396-400. 2017.
  • Sasaki, K., Mitsuda, N., Nashima, K., Kishimoto, K., Katayose, Y., Kanamori, H., Ohmiya, A. Generation of expressed sequence tags for discovery of genes responsible for floral traits of Chrysanthemum morifolium by next-generation sequencing technology. BMC Genomics. 18: 683. 2017.
  • Yang, C., Song, J., Ferguson, A., Klisch, D., Simpson, K., Mo, R., Taylor, B., Mitsuda, N., Wilson, Z.A. Transcription factor MYB26 is key to spatial specificity in anther secondary thickening formation. Plant Physiol. 175: 333-350. 2017.
  • Oda-Yamamizo, C., Mitsuda, N., Ohmiya, A. Heterologous Expression of Chimeric Repressor of Arabidopsis ANAC046 Delays Chlorophyll Degradation in Petunia Flowers. Plant Mol. Biol. Rep. in press. 2017.
  • Mitani, Y., Oshima, Y., Mitsuda, N., Tomioka, A., Sukegawa, M., Fujita, M., Kaji, H., Ohmiya, Y. Efficient production of glycosylated Cypridina luciferase using plant cells. Prot. Exp. Purif. 133: 102-109. 2017.
  • Khare, D., Mitsuda, N., Lee, S., Song, W.Y., Hwang, D., Ohme-Takagi, M., Martinoia, E., Lee, Y., Hwang, J.U. Root avoidance of toxic metals requires the GeBP-LIKE 4 transcription factor in Arabidopsis thaliana. New Phytol. 213: 1257-1273. 2017.
  • Rymen, B., Kawamura, A., Iwase, A., Ikeda, M., Mitsuda, N., Koncz, C., Ohme-Takagi, M., Matsui, M., Breuer, C., Shibata, M., Schaefer, S., Sugimoto, K. ABA suppresses root hair growth through OBP4-mediated repression of RSL2. Plant Physiol. 173: 1750-1762. 2017.

2016

  • Nagatoshi, Y., Ikeda, M., Kishi, H., Hiratsu, K., Muraguchi, A., Ohme-Takagi., M. Induction of a dwarf phenotype with IBH1 may enable increased production of　plant-made pharmaceuticals in plant factory conditions. Plant Biotech. J. 14: 887-894. 2016.
  • Iwase, A., Harashima, H., Ikeuchi, M., Rymen, B., Ohnuma, M., Komaki, S., Morohashi, K., Kurata, T., Nakata, M., Ohme-Takagi, M., Grotewold, E., Sugimoto, K. WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis. Plant Cell in press. 2016.
  • Thussagunpanit, J., Nagai, Y., Nagae, M., Mashiguchi, K., Mitsuda, N., Ohme-Takagi, M., Nakano, T., Nakamura, H., Asami, T. Involvement of STH7 in Light-adapted Development in Arabidopsis thaliana Promoted by both Strigolactone and Karrikin. Biosci. Biotech. Biochem. 81: 292-301. 2016.
  • Fujiwara, S., Mitsuda, N. ANAC075, a putative regulator of VASCULAR-RELATED NAC-DOMAIN7, is a repressor of flowering. Plant Biotechnol. 33: 255-264. 2016.
  • Chung, K., Nakano, T., Fujiwara, S., Mitsuda, N., Otsuki, N., Tsujimoto-Inui, Y., Naito, Y., Ohme-Takagi, M., Suzuki, K. The ERF transcription factor EPI1 is a negative regulator of darkness- and jasmonate-stimulated senescence in Arabidopsis. Plant Biotechnol. 33: 235-243. 2016.
  • Chung, K., Sakamoto, S., Mitsuda, N., Suzuki, K., Ohme-Takagi, M., Fujiwara, S. WUSCHEL-RELATED HOMEOBOX 2 is a transcriptional repressor involved in lateral organ formation and separation in Arabidopsis. Plant Biotechnol. 33: 245-254. 2016.
  • Oshima, Y., Mitsuda, N. Enhanced cuticle accumulation by employing MIXTA-like transcription factors. Plant Biotechnol. 33: 161-168. 2016.
  • Lin, Y.F., Chen, Y.Y., Hsiao, Y.Y., Shen, C.Y., Hsu, J.L., Yeh, C.M., Mitsuda, N., Ohme-Takagi, M., Liu, Z.J., and Tsai, W.C. Genome-wide identification of TCP transcription factor family and functional characterization of two TCP genes, PePCF10 and PeCIN8, preferentially expressed in developing ovules of Phalaenopsis equestris. J. Exp. Bot. 67: 5051-5066. 2016.
  • Kondo, Y., Nurani, A.F., Saito, C., Ichihashi, Y., Saito, M., Yamazaki, K., Mitsuda, N., Ohme-Takagi, M., and Fukuda, H. Vascular cell induction system using Arabidopsis leaves (VISUAL) visualizes the sequential phloem differentiation process. Plant Cell 28: 1250-1262. 2016
  • Azuma, M., Mitsuda, N., Goto, K., Oshima, Y., Ohme-Takagi, M., Otagaki, S., Matsumoto, S., and Shiratake, K. The petal-specific InMYB1 promoter functions by recognizing petaloid cells. Plant Cell Physiol. 57: 580-587. 2016.
  • Rohani, E.R., Chiba, M., Kawaharada, M., Asano, T., Oshima, Y., Mitsuda, N., Ohme-Takagi, M., Fukushima, A., Rai, A., Saito, K., and Yamazaki, M. An MYB transcription factor regulating specialized metabolisms in Ophiorrhiza pumila. Plant Biotechnol. 33: 1-9. 2016.
  • Oda-Yamamizo, C., Mitsuda, N., Sakamoto, S., Ogawa, D., Ohme-Takagi, T., and Ohmiya, A. The NAC transcription factor ANAC046 is a positive regulator of chlorophyll degradation and senescence in Arabidopsis leaves. Sci. Rep. 6: 23609. 2016.
  • Nagatoshi, Y., Mitsuda, N., Hayashi, M., Inoue, S., Okuma, E., Kubo, A., Murata, Y., Seo, M., Saji, H., Kinoshita, T., and Ohme-Takagi, M. GOLDEN 2-LIKE transcription factors for chloroplast development affect ozone tolerance through the regulation of stomatal movement. Proc. Natl. Acad. Sci. U.S.A. 113. 4218-4223. 2016.
    Featured article; See more detail by press release

  • Sakamoto, S., Takata, N., Oshima, Y., Yoshida, K., Taniguchi, T., and Mitsuda, N. Wood reinforcement of poplar by rice NAC transcription factor. Sci. Rep. 6: 19925. 2016.
    Featured article; See more detail by press release

  • Azuma, M., Morimoto, R., Hirose, M., Morita Y., Hoshino, A., Iida, S., Oshima, Y., Mitsuda, N., Ohme-Takagi, M., and Shiratake, K. A petal‐specific InMYB1 promoter from Japanese morning glory: a useful tool for molecular breeding of floricultural crops. Plant Biotech. J. 14: 354-363. 2016.
  • Zhang, G.Q., Xu, Q., Bian, C., Tsai, W.C., Yeh, C.M., Liu, K.W., Yoshida, K., Zhang, L., Chang, S.B., Chen, F., Shi, Y., Su, Y.Y., Zhang, Y.Q., Chen, L.J., Yin, Y., Lin, M., Huang, H., Deng, H., Wang, Z., Zhu, S., Zhao, X., Deng, C., Niu, S.C., Huang, J., Wang, M., Liu, G.H., Yang, H.J., Xiao, X.J., Hsiao, Y.Y., Wu, W.L., Chen, Y.Y., Mitsuda, N., Ohme-Takagi, M., Luo, Y.B., Van de Peer, Y., and Liu, Z.J. The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution. Sci. Rep. 6: 19029. 2016.

2015

  • Hur, Y.S., Um, J.H., Kim, S., Kim, K., Park, H.J., Lim, J.S., Kim, W.Y., Jun, S.E., Yoon, E.K., Lim. J., Ohme-Takagi, M., Kim, D., Park, J., Kim, G.T., and Cheon, C*. Arabidopsis thaliana homeobox 12 (ATHB12), a homeodomain-leucine zipper protein, regulates leaf growth by promoting cell expansion and endoreduplication. New Phytol. 205: 316-328. 2015.
  • Sakamoto, S., Yoshida, K., Sugihara, S., and Mitsuda, N. Development of a new high-throughput method to determine the composition of ten monosaccharides including 4-O-methyl glucuronic acid from plant cell walls using ultra-performance liquid chromatography. Plant Biotechnol. 32: 55-63. 2015.

  • Jung, C., Zhao, P., Seo, J.S., Mitsuda, N., Deng, S., and Chua, N.H. PLANT U-BOX PROTEIN10 Regulates MYC2 Stability in Arabidopsis. Plant Cell 27: 2016-2031. 2015.
  • Sakamoto, S., and Mitsuda, N. Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol. 56: 299-310. 2015.

2014

  • Yokotani, N., Tsuchida-Mayama, T., Ichikawa, H., Mitsuda, N., Ohme-Takagi, M., Kaku, H., Minami, E., and Nishizawa, Y. OsNAC111, a Blast Disease Responsive Transcription Factor in Rice, Positively Regulates the Expression of Defense-Related Genes. Mol. Plant-Microbe Interact. 27: 1027-1034. 2014.
  • Sewelam, N., Oshima, Y., Mitsuda, N., and Ohme-Takagi, M. A step towards understanding plant responses to multiple environmental stresses: a genome-wide study. Plant Cell Environ. 37: 2024-2035. 2014.

  • Yoshida, H., Hirano, K., Sato, T., Mitsuda, N., Nomoto, M., Maeo, K., Koketsu, E., Mitani, R., Kawamura, M., Ishiguro, S., Tada, Y., Ohme-Takagi, M., Matsuoka, M., and Ueguchi-Tanaka, M. DELLA protein functions as a transcriptional activator through the DNA binding of the INDETERMINATE DOMAIN family proteins. Proc. Natl. Acad. Sci. USA 111: 7861-7866. 2014.
  • Fujiwara, S., Mitsuda, N., Nakai, Y., Kigoshi, K., Suzuki, K., and Ohme-Takagi, M. Chimeric repressor analysis identifies MYB87 as a possible regulator of morphogenesis via cell wall organization and remodeling in Arabidopsis. Biotech. Lett. 36: 1049-1057. 2014.

  • Kazama, D., Kurusu, T., Mitsuda, N., Ohme-Takagi, M., and Tada, Y. Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology. Plant Signal Behav. 9: e28211. 2014.
  • Fujiwara, S., Kigoshi, K., Mitsuda, N., Suzuki, K., and Ohme-Takagi, M. VP16 fusion efficiently reveals the function of transcriptional repressors in Arabidopsis. Plant Biotechnol. 31: 123-132. 2014.

  • Fujiwara, S., Sakamoto, S., Kigoshi, K., Suzuki, K., and Ohme-Takagi, M. VP16 fusion induces the multiple-knockout phenotype of redundant transcriptional repressors partly by Med25-independent mechanisms in Arabidopsis. FEBS Lett. 588: 3665-3672. 2014.

2013

  • Ikeda, M., Mitsuda, N., and Ohme-Takagi, M. ATBS1 INTERACTING FACTORs negatively regulate Arabidopsis cell elongation in the triantagonistic bHLH system. Plant Signal Behav 8: e23448. 2013.
  • Kazama, D., Itakura, M., Kurusu, T., Mitsuda, N., Ohme-Takagi, M., and Tada, Y. Identification of chimeric repressors that confer salt and osmotic stress tolerance in Arabidopsis. Plants 2: 769-785. 2013.
  • Tanaka, Y., Oshima, Y., Yamamura, T., Sugiyama, M., Mitsuda, N., Ohtsubo, N., Ohme-Takagi, M., and Terakawa, T. Multi-petal cyclamen flowers produced by AGAMOUS chimeric repressor expression. Sci. Rep 3: 2641. 2013.
  • Yoshida, K., Sakamoto, S., Kawai, T., Kobayashi, Y., Sato, K., Ichinose, Y., Yaoi, K., Akiyoshi-Endo, M., Sato, H., Takamizo, T., Ohme-Takagi, M., and Mitsuda, N. Engineering the Oryza sativa cell wall with rice NAC transcription factors regulating secondary wall formation. Front Plant Sci. 4: 383. 2013.
  • Oshima, Y. and Mitsuda N. The MIXTA-like Transcription factor MYB16 is a major regulator of cuticle formation in vegetative organs. Plant Signal Behav. 8: e26826. 2013.
  • Iwase, A., Mitsuda, N., Ikeuchi, M., Ohnuma, M., Koizuka, C., Kawamoto, K., Imamura, J., Ezura, H. and Sugimoto, K. Arabidopsis WIND1 induces callus formation in rapeseed, tomato and tobacco. Plant Signal Behav. 8: e27432. 2013.
  • Nakai Y, Fujiwara S, Kubo Y, and Sato MH. Overexpression of VOZ2 confers biotic stress tolerance but decreases abiotic stress resistance in Arabidopsis. Plant Signal. Behav. e23358. 2013
  • Koyama, T., Nii, H., Mitsuda, N., Ohta, M., Kitajima, S., Ohme-Takagi, M., and Sato, F. A regulatory cascade involving class II ETHYLENE RESPONSE FACTOR transcriptional repressors operates in the progression of leaf senescence. Plant Physiol. 162: 991-1005. 2013
  • Nakai, Y., Nakahira, Y., Sumida, H., Takebayashi, K., Nagasawa, Y., Yamasaki, K., Akiyama, M., Ohme-Takagi, M., Fujiwara, S., Shiina, T., Mitsuda, N., Fukusaki, E., Kubo, Y., and Sato, M.H. Vascular plant one-zinc-finger protein 1/2 transcription factors regulate abiotic and biotic stress responses in Arabidopsis. Plant J. 73: 761-775. 2013
  • Nakata, M., Mitsuda, N., Herde, M., Koo, A.J., Moreno, J.E., Suzuki, K., Howe, G.A., and Ohme-Takagi, M. A bHLH-type transcription factor, ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR/JA-ASSOCIATED MYC2-LIKE1, acts as a repressor to negatively regulate jasmonate signaling in Arabidopsis. Plant Cell 25: 1641-1656. 2013
  • Niwa, M., Daimon, Y., Kurotani, K., Higo, A., Pruneda-Paz, J.L., Breton, G., Mitsuda, N., Kay, S.A., Ohme-Takagi, M., Endo, M., and Araki, T. BRANCHED1 interacts with FLOWERING LOCUS T to repress the floral transition of the axillary meristems in Arabidopsis. Plant Cell 25: 1228-1242. 2013
  • Oshima, Y., Shikata, M., Koyama, T., Ohtsubo, N., Mitsuda, N., and Ohme-Takagi, M. MIXTA-Like transcription factors and WAX INDUCER1/SHINE1 coordinately regulate cuticle development in Arabidopsis and torenia fournieri. Plant Cell 25: 1609-1624. 2013
  • Toda, Y., Tanaka, M., Ogawa, D., Kurata, K., Kurotani, K., Habu, Y., Ando, T., Sugimoto, K., Mitsuda, N., Katoh, E., Abe, K., Miyao, A., Hirochika, H., Hattori, T., and Takeda, S. RICE SALT SENSITIVE3 forms a ternary complex with JAZ and class-C bHLH factors and regulates jasmonate-induced gene expression and root cell elongation. Plant Cell 25: 1709-1725. 2013

2012

  • Ono, M., Hiyama, S., Higuchi, Y., Kamada, H., Nitasaka, E., Koyama, T., Mitsuda, N., Ohme-Takagi, M., and Sage-Ono, K. Morphological changes in ipomoea nil using chimeric repressors of Arabidopsis TCP3 and TCP5. Plant Biotechnol 29: 457-463. 2012
  • Ikeda, M., Fujiwara, S., Mitsuda, N., and Ohme-Takagi, M. A triantagonistic basic helix-loop-helix system regulates cell elongation in Arabidopsis. Plant Cell 24: 4483-4497. 2012
  • Kim, J.S., Mizoi, J., Kidokoro, S., Maruyama, K., Nakajima, J., Nakashima, K., Mitsuda, N., Takiguchi, Y., Ohme-Takagi, M., Kondou, Y., Yoshizumi, T., Matsui, M., Shinozaki, K., and Yamaguchi-Shinozaki, K. Arabidopsis GROWTH-REGULATING FACTOR7 functions as a transcriptional repressor of abscisic acid- and osmotic stress-Responsive genes, including DREB2A. Plant Cell 24: 3393-3405. 2012
  • Sato H, Yoshida K, Mitsuda N, Ohme-Takagi M, Takamizo T. Male-sterile and cleistogamous phenotypes in tall fescue induced by chimeric repressors of SUPERWOMAN1 and OsMADS58. Plant Sci. 183: 183-189. 2012
  • Tanaka W, Toriba T, Ohmori Y, Yoshida A, Kawai A, Mayama-Tsuchida T, Ichikawa H, Mitsuda N, Ohme-Takagi M, Hirano HY. The YABBY gene TONGARI-BOUSHI1 is involved in lateral organ development and maintenance of meristem organization in the rice spikelet. Plant Cell. 24:80-95. 2012
  • Kawaguchi, Y, Nishiuchi, T, Kodama, H, Nakano, T, Nishimura, K, Shimamura, K, Yamaguchi, K, Kuchitsu, K, Shinshi, H, Suzuki, K. Fungal elicitor-induced retardation and its restoration of root growth in tobacco seedlings. Plant Growth Regulation 66: 59-68. 2012
  • Nakano, T, Naito, Y, Kakegawa, K, Ohtsuki, N, Tsujimoto-Inui, Y, Shinshi, H, Suzuki, K. Increase in pectin deposition by overexpression of an ERF gene in cultured cells of Arabidopsis thaliana. Biotechnology Letters, 34: 763-769. 2012

2011

  • Oshima Y, Mitsuda N, Nakata M, Nakagawa T, Nagaya S, Kato K, Ohme-Takagi M. Novel vector systems to accelerate functional analysis of transcription factors using chimeric repressor gene-silencing technology (CRES-T). Plant Biotechnology. 28: 201-210. 2011
  • Sasaki K, Yamaguchi H, Narumi T, Shikata M, Oshima Y, Nakata M, Mitsuda N, Ohme-Takagi M, Ohtsubo N. Utilization of a floral organ-expressing AP1 promoter for generation of new floral traits in Torenia fournieri Lind. Plant Biotechnology. 28: 181-188. 2011
  • Sage-Ono K, Ozeki Y, Hiyama S, Higuchi Y, Kamada H, Mitsuda N, Ohme-Takagi M, Ono M. Induction of double flowers in Pharbitis nil using a class-C MADSbox transcription factor with Chimeric REpressor gene-Silencing Technology. Plant Biotechnology. 28: 153-165. 2011
  • Gion K, Suzuri R, Shikata M, Mitsuda N, Oshima Y, Koyama T, Ohme-Takagi M, Ohtsubo N, Tanaka Y. Morphological changes of Rosa hybrida by a chimeric repressor of Arabidopsis TCP3. Plant Biotechnology. 28: 149-152. 2011
  • Tanaka Y, Yamamura T, Oshima Y, Mitsuda N, Koyama T, Ohme-Takagi M, Terakawa T. Creating ruffled flower petals in Cyclamen persicum by expression of the chimeric cyclamen TCP repressor. Plant Biotechnology. 28: 141-147. 2011
  • Shikata, M., Narumi, T., Yamaguchi, H., Sasaki, K., Aida, R., Oshima, Y., Takiguchi, Y., Ohme-Takagi, M., Mitsuda, N., and Ohtsubo, N. Efficient production of novel floral traits in torenia by collective transformation with chimeric repressors of Arabidopsis transcription factors. Plant Biotechnol 28: 189-199. 2011.
  • Narumi T, Aida R, Koyama T, Yamaguchi H, Sasaki K, Shikata M, Nakayama M, Ohme-Takagi M, Ohtsubo N. Arabidopsis chimeric TCP3 repressor produces novel floral traits in Torenia fournieri and Chrysanthemum morifolium. Plant Biotechnology. 28: 131-140. 2011
  • Mitsuda N, Takiguchi Y, Shikata M, Sage-Ono K, et al. The new FioreDB database provides comprehensive information on plant transcription factors and phenotypes induced by CRES-T in ornamental and model plants. Plant Biotechnology. 28: 123-130. 2011
  • Yamaguchi M, Mitsuda N, Ohtani M, Ohme-Takagi M, Kato K, Demura T. VASCULAR-RELATED NAC-DOMAIN7 directly regulates the expression of a broad range of genes for xylem vessel formation. Plant J. 66: 579-590. 2011
  • Iwase A, Mitsuda N, Koyama T, Hiratsu K, Kojima M, Arai T, Inoue Y, Seki M, Sakakibara H, Sugimoto K, Ohme-Takagi M. The AP2/ERF transcription factor WIND1 controls cell dedifferentiation in Arabidopsis. Curr Biol. 21:508-514. 2011
  • Mito T, Seki M, Shinozaki K, Ohme-Takagi M, Matsui K. Generation of chimeric repressors that confer salt tolerance in Arabidopsis and rice. Plant Biotechnol J. 9:736-746. 2011
  • Koyama T, Ohme-Takagi M, Sato F. Generation of serrated and wavy petals by inhibition of the activity of TCP transcription factors in Arabidopsis thaliana. Plant Signal Behav. 6:697-699. 2011
  • Nishizawa-Yokoi A, Nosaka R, Hayashi H, Tainaka H, Maruta T, Tamoi M, Ikeda M, Ohme-Takagi M, Yoshimura K, Yabuta Y, Shigeoka S. HsfA1d and HsfA1e involved in the transcriptional regulation of HsfA2 function as key regulators for the Hsf signaling network in response to environmental stress. Plant Cell Physiol. 52:933-45. 2011
  • Mitsuda N, Matsui K, Ikeda M, Nakata M, Oshima Y, Nagatoshi Y, Ohme-Takagi M. CRES-T, an effective gene silencing system utilizing chimeric repressors. Methods Mol Biol. 754:87-105. 2011
  • Ohtani M, Nishikubo N, Xu B, Yamaguchi M, Mitsuda N, Goue N, Shi F, Ohme-Takagi M, Demura T. A NAC domain protein family contributing to the regulation of wood formation in poplar. Plant J. 67:499-512. 2011
  • Asahina M, Azuma K, Pitaksaringkarn W, Yamazaki T, Mitsuda N, Ohme-Takagi M, Yamaguchi S, Kamiya Y, Okada K, Nishimura T, Koshiba T, Yokota T, Kamada H, Satoh S. Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis. Proc Natl Acad Sci USA. 108:16128-16132. 2011
  • Ikeda M, Mitsuda N, Ohme-Takagi M. Arabidopsis HsfB1 and HsfB2b act as repressors for the expression of heat-inducible Hsfs but positively regulate the acquired thermotolerance. Plant Physiol. 157:1243-1254. 2011
  • Iwase A, Ohme-Takagi M, Sugimoto K. WIND1: A key molecular switch for plant cell dedifferentiation. Plant Signal Behav. 6:1943-1945. 2011
  • Haga N, Kobayashi K, Suzuki T, Maeo K, Kubo M, Ohtani M, Mitsuda N, Demura T, Nakamura K, Jurgens G, and Ito M. Mutations in MYB3R1 and MYB3R4 cause pleiotropic developmental defects and preferential down-regulation of multiple G2/M-specific genes in Arabidopsis. Plant Physiol. 157: 706-717. 2011
  • Kim TS, Kim WY, Fujiwara S, Kim J, Cha JY, Park JH, Lee SY, Somers DE HSP90 functions in the circadian clock through stabilization of the client F-box protein ZEITLUPE. Proc Natl Acad Sci U S A. 108: 16843-16848. 2011

2010

  • Yamaguchi M, Ohtani M, Mitsuda N, Kubo M, Ohme-Takagi M, Fukuda H, Demura T. VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis. Plant Cell. 22: 1249-1263. 2010
  • Eklund DM, Staldal V, Valsecchi I, Cierlik I, Eriksson C, Hiratsu K, Ohme-Takagi M, Sundstrom JF, Thelander M, Ezcurra I, Sundberg E. The Arabidopsis thaliana STYLISH1 protein acts as a transcriptional activator regulating auxin biosynthesis. Plant Cell. 22: 349-363. 2010
  • Tejedor-Cano J, Prieto-Dapena P, Almoguera C, Carranco R, Hiratsu K, Ohme-Takagi M, Jordano J. Loss of function of the HSFA9 seed longevity program. Plant Cell Environ. 33: 1408-1417. 2010
  • Koyama T, Sato F, Ohme-Takagi M. A role of TCP1 in the longitudinal elongation of leaves in Arabidopsis. Biosci Biotechnol Biochem. 74: 2145-2147. 2010
  • Mitsuda N, Ikeda M, Takada S, Takiguchi Y, Kondou Y, Yoshizumi T, Fujita M, Shinozaki K, Matsui M, Ohme-Takagi M. Efficient yeast one-/two-hybrid screening using a library composed only of transcription factors in Arabidopsis thaliana. Plant Cell Physiol. 51: 2145-2151. 2010
  • Koyama T, Mitsuda N, Seki M, Shinozaki K, Ohme-Takagi M. TCP transcription factors regulate the activities of ASYMMETRIC LEAVES1 and miR164, as well as the auxin response, during differentiation of leaves in Arabidopsis. Plant Cell. 22:3574-88. 2010

2009

  • Mitsuda N, Ohme-Takagi M. Functional analysis of transcription factors in Arabidopsis. Plant Cell Physiol. 50: 1232-1248. 2009
  • Ikeda M, Ohme-Takagi M. A Novel Group of Transcriptional Repressors in Arabidopsis. Plant Cell Physiol. 50: 970-975. 2009
  • Iwase A, Matsui K, Ohme-Takagi M. (2009) Manipulation of plant metabolism by transcription factors. Plant Biotechnology. 26: 29-38. 2009
  • Iwase A, Hideno A, Watanabe K, Mitsuda N, Ohme-Takagi M. A chimeric NST repressor has the potential to improve glucose productivity from plant cell walls. J Biotechnol. 142: 279-284. 2009
  • Ikeda M, Mitsuda N, Ohme-Takagi M. The Arabidopsis WUSCHEL is a bifunctional transcription factor that acts as a repressor in stem cell regulation and as an activator in floral patterning. Plant Cell. 21: 3493-3505. 2009
  • Shikata M, Koyama T, Mitsuda N, Ohme-Takagi M. Arabidopsis SBP-box Genes SPL10, SPL11 and SPL2 Control Morphological Change in Association with Shoot Maturation in Reproductive Phases. Plant Cell Physiol. 50: 2133-2145. 2009
  • Matsui K, Ohme-Takagi M. Detection of protein-protein interactions in plants using the transrepressive activity of the EAR motif repression domain. Plant J. 61: 570-578. 2009
  • Tsujimoto-Inui, Y, Naito, Y, Sakurai, N, Suzuki, H, Sasaki, R, Takahashi, H, Ohtsuki, N, Nakano, T, Yanagisawa, S, Shibata, D, Uchimiya, H, Shinshi, H, Suzuki, K. Functional genomics of the Dof transcription factor family genes in suspension-cultured cells of Arabidopsis thaliana. Plant Biotechnology 26: 15-28. 2009
  • Naito, Y, Tsujimoto-Inui, Y, Nakano, T, Shinshi, H, Suzuki, K. A batch processing protocol for construction of expression vector plasmids from a cDNA collection and Agrobacterium-mediated transformation of suspension-cultured cells of Arabidopsis. Plant Biotechnology 26: 415-419. 2009

2008

  • Narumi T, Aida R, Niki T, Nishijima T, Mitsuda N, Hiratsu K, Ohme-Takagi M, Ohtsubo N. Chimeric AGAMOUS repressor induces serrated petal phenotype in Torenia fournieri similar to that induced by cytokinin application. Plant Biotechnology. 25: 45-53. 2008
  • Mitsuda N, Umemura Y, Ikeda M, Shikata M, Koyama T, Matsui K, Narumi T, Aida R, Sasaki K, Hiyama T, Higuchi Y, Ono M, Isuzugawa K, Saitoh K, Endo R, Ikeda K, Nakatsuka T, Nishihara M, Yamamura T., Terakawa T., Ohtsubo N., Ohme-Takagi M. Fiore DB: a database of Phnotypic information induced by the chimeric repressor silencing technology (CRES-T) in Arabidopsis and floricultural plants. Plant Biotechnology. 25: 37-43. 2008
  • Shikata M, Ohme-Takagi M. The utility of transcription factors for manipulation of floral traits. Plant Biotechnology. 25: 31-36. 2008
  • Matsui K, Umemura Y, Ohme-Takagi M. AtMYBL2, a protein with a single MYB domain, acts as a negative regulator of anthocyanin biosynthesis in Arabidopsis. Plant J. 55: 954-967. 2008
  • Kunieda T, Mitsuda N, Ohme-Takagi M, Takeda S, Aida M, Tasaka M, Kondo M, Nishimura M, Hara-Nishimura I. NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in Arabidopsis. Plant Cell. 20: 2631-2642. 2008
  • Mitsuda N, Ohme-Takagi M. NAC transcription factors NST1 and NST3 regulate pod shattering in a partially redundant manner by promoting secondary wall formation after the establishment of tissue identity. Plant J. 56: 768-778. 2008

2007

  • Mitsuda N, Iwase A, Yamamoto H, Yoshida M, Seki M, Shinozaki K, Ohme-Takagi M. NAC transcription factors, NST1 and NST3, are key regulators of the formation of secondary walls in woody tissues of Arabidopsis. Plant Cell. 19: 270-280. 2007
  • Koyama T, Furutani M, Tasaka M, Ohme-Takagi M. TCP Transcription Factors Control the Morphology of Shoot Lateral Organs via Negative Regulation of the Expression of Boundary-Specific Genes in Arabidopsis. Plant Cell. 19: 473-484. 2007
  • Ito T, Nagata N, Yoshiba Y, Ohme-Takagi M, Ma H, Shinozaki K. Arabidopsis MALE STERILITY1 encodes a PHD-type transcription factor and regulates pollen and tapetum development. Plant Cell. 19: 3549-3562. 2007
  • Haga, N, Kato, K, Murase, M, Araki, S, Kubo, M, Demura, T., Suzuki, K, Mullar, I, Vos, U, Jurgens, G, Ito, M. R1R2R3-Myb proteins positively regulate cytokinesis through activation of KNOLLE transcription in Arabidopsis thaliana. Development 134: 1101-111. 2007
  • Shinya, T, Hanai, K, Garis, I, Suzuki, K, Matsuoka, K, Matsuoka, H, and Saito, M. Characterization of NtChitIV, a class IV chitinase induced by β-1,3-, 1,6-glucan elictor from Alternaria alternata 102: antagonistic effect of salicylic acid and methyl jasmonate on the induction of NtChiIV. Biochem. Biophys. Res. Comm. 353: 311-317. 2007
  • Suzuki, K, Yano, A, Nishiuchi, N, Nakano, T, Kodama, H, Yamaguchi, K, Shinshi, H. Comprehensive analysis of early response genes to two different microbial elicitors in tobacco cells. Plant Science 173: 291-301. 2007

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Bioproduction Research Institute

AIST Hokkaido
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