Biotechnology Research Institute for Drug Discovery
breadcrumb navigationOrganization > Biotechnology Research Institute for Drug Discovery > Research Groups > Stem Cell Biotechnology Research Group > Publication

Stem Cell Biotechnology Research Group

List of titles, authors, and journal information of published papers.



Waves of chromatin modifications in mouse dendritic cells in response to LPS stimulation
Vandenbon A, Kumagai Y, Lin M, Suzuki Y, Nakai K
Genome Biol. 2018 Sep 19;19(1):138
Ribosome Incorporation into Somatic Cells Promotes Lineage Transdifferentiation towards Multipotency
Ito N, Katoh K, Kushige H, Saito Y, Umemoto T, Matsuzaki Y, Kiyonari H, Kobayashi D, Soga M, Era T, Araki N, Furuta Y, Suda T, Kida Y, Ohta K
Sci Rep. 2018 Jan 26;8(1):1634


Notch and Hippo signaling converge on Strawberry Notch 1 (Sbno1) to synergistically activate Cdx2 during specification of the trophectoderm
Watanabe Y, Miyasaka KY, Kubo A, Kida YS, Nakagawa O, Hirate Y, Sasaki H, Ogura T
Sci Rep. 2017 Apr 12;7:46135
Brief exposure to small molecules allows induction of mouse embryonic fibroblasts into neural crest-like precursors
Takayama Y, Wakabayashi T, Kushige H, Saito Y, Shibuya Y, Shibata S, Akamatsu W, Okano H, Kida YS
FEBS Lett. 2017 Feb;591(4):590-602


Novel Strategy to Control Transgene Expression Mediated by a Sendai Virus-Based Vector Using a Nonstructural C Protein and Endogenous MicroRNAs
Sano M, Iijima M, Ohtaka M, Nakanishi M
PLoS One. 2016 Oct 20;11(10):e0164720
Red blood cell coagulation induced by low-temperature plasma treatment
Miyamoto K, Ikehara S, Takei H, Akimoto Y, Sakakita H, Ishikawa K, Ueda M, Ikeda J, Yamagishi M, Kim J, Yamaguchi T, Nakanishi H, Shimizu T, Shimizu N, Hori M, Ikehara Y
Arch Biochem Biophys. 2016 Sep 1;605:95-101
Galectin expression in healing wounded skin treated with low-temperature plasma: Comparison with treatment by electronical coagulation
Akimoto Y, Ikehara S, Yamaguchi T, Kim J, Kawakami H, Shimizu N, Hori M, Sakakita H, Ikehara Y
Arch Biochem Biophys. 2016 Sep 1;605:86-94
A novel postoperative immobilization model for murine Achilles tendon sutures
Shibuya Y, Takayama Y, Kushige H, Jacinto S, Sekido M, Kida YS
Lab Anim. 2016 Aug;50(4):308-11
ERRγ Is Required for the Metabolic Maturation of Therapeutically Functional Glucose-Responsive β Cells
Yoshihara E, Wei Z, Lin CS, Fang S, Ahmadian M, Kida Y, Tseng T, Dai Y, Yu RT, Liddle C, Atkins AR, Downes M, Evans RM
Cell Metab. 2016 Apr 12;23(4):622-34
Evaluation of fluorescence imaging with indocyanine green in hepatocellular carcinoma
Kaibori M, Matsui K, Ishizaki M, Iida H, Sakaguchi T, Tsuda T, Okumura T, Inoue K, Shimada S, Ohtsubo S, Kusano M, Ikehara Y, Ozeki E, Kitawaki T, Kon M
Cancer Imaging. 2016 Apr 6;16:6
In Vitro Reconstruction of Neuronal Networks Derived from Human iPS Cells Using Microfabricated Devices
Takayama Y, Kida YS
PLoS One. 2016 Feb 5;11(2):e0148559
Effects of ageing on expression of the muscle-specific E3 ubiquitin ligases and Akt-dependent regulation of Foxo transcription factors in skeletal muscle
Wagatsuma A, Shiozuka M, Takayama Y, Hoshino T, Mabuchi K, Matsuda R
Mol Cell Biochem. 2016 Jan;412(1-2):59-72



ERRs Mediate a Metabolic Switch Required for Somatic Cell Reprogramming to Pluripotency
Kida YS, Kawamura T, Wei Z, Sogo T, Jacinto S, Shigeno A, Kushige H, Yoshihara E, Liddle C, Ecker JR, Yu RT, Atkins AR, Downes M, Evans RM
Cell Stem Cell. 2015 May 7;16(5):547-55 Short Articles
Simple Micropatterning Method For Enhancing Fusion Efficiency and Responsiveness to Electrical Stimulation of C2C12 Myotubes
Takayama Y, Wagatsuma A, Hoshino T, Mabuchi K
Biotechnol Prog. 2015 Jan-Feb;31(1):220-5

Page top


Glycoproteomics Approach for Identifying Glycobiomarker Candidate Molecules for Tissue Type Classification of Non-small Cell Lung Carcinoma
Hirao Y, Matsuzaki H, Iwaki J, Kuno A, Kaji H, Ohkura T, Togayachi A, Abe M, Nomura M, Noguchi M, Ikehara Y, Narimatsu H
J Proteome Res. 2014 Nov 7;13(11):4705-16
A genetically engineered mouse model developing rapid progressive pancreatic ductal adenocarcinoma
Yamaguchi T, Ikehara S, Nakanishi H, Ikehara Y
J Pathol. 2014 Oct;234(2):228-38
Methylome, transcriptome, and PPARγ cistrome analyses reveal two epigenetic transitions in fat cells
Takada H, Saito Y, Mituyama T, Wei Z, Yoshihara E, Jacinto S, Downes M, Evans RM, Kida YS
Epigenetics. 2014 Sep;9(9):1195-206
Mice lacking α1,3-fucosyltransferase 9 exhibit modulation of in vivo immune responses against pathogens
Kashiwazaki H, Kakizaki M, Ikehara Y, Togayachi A, Narimatsu H, Watanabe R
Pathol Int. 2014 May;64(5):199-208
Synthesis and evaluation of a radioiodinated peptide probe targeting αvβ6 integrin for the detection of pancreatic ductal adenocarcinoma
Ueda M, Fukushima T, Ogawa K, Kimura H, Ono M, Yamaguchi T, Ikehara Y, Saji H
Biochem Biophys Res Commun. 2014 Mar 14;445(3):661-6
Novel Glycobiomarker for Ovarian Cancer That Detects Clear Cell Carcinoma
Sogabe M, Nozaki H, Tanaka N, Kubota T, Kaji H, Kuno A, Togayachi A, Gotoh M, Nakanishi H, Nakanishi T, Mikami M, Suzuki N, Kiguchi K, Ikehara Y, Narimatsu H
J Proteome Res. 2014 Mar 7;13(3):1624-35
Application of a Glycoproteomics-Based Biomarker Development Method: Alteration in Glycan Structure on Colony Stimulating Factor 1 Receptor as a Possible Glycobiomarker Candidate for Evaluation of Liver Cirrhosis
Ocho M, Togayachi A, Iio E, Kaji H, Kuno A, Sogabe M, Korenaga M, Gotoh M, Tanaka Y, Ikehara Y, Mizokami M, Narimatsu H
J Proteome Res. 2014 Mar 7;13(3):1428-37
Induced Current Pharmacological Split Stimulation System for Neuronal Networks
Saito A, Takayama Y, Moriguchi H, Kotani K, Jimbo Y
IEEE Trans Biomed Eng. 2014 Feb;61(2):463-72

Page top


α2-3 Sialic acid glycoconjugate loss and its effect on infection with Toxoplasma parasites
Nishikawa Y, Ogiso A, Kameyama K, Nishimura M, Xuan X, Ikehara Y
Exp Parasitol. 2013 Nov;135(3):479-85
Reconstruction of a robust glycodiagnostic agent supported by multiple lectin-assisted glycan profiling
Kuno A, Sato T, Shimazaki H, Unno S, Saitou K, Kiyohara K, Sogabe M, Tsuruno C, Takahama Y, Ikehara Y, Narimatsu H
Proteomics Clin Appl. 2013 Oct;7(9-10):642-7
Efficient sequential Bayesian inference method for real-time detection and sorting of overlapped neural spikes
Haga T, Fukayama O, Takayama Y, Hoshino T, Mabuchi K
J Neurosci Methods. 2013 Sep 30;219(1):92-103
Formation of Membrane-like Structures in Clotted Blood by Mild Plasma Treatment during Hemostasis
Ikehara Y, Sakakita H, Shimizu N, Ikehara S, Nakanishi H
J Photopol Sci Technoil. 2013 Aug 31;26(4):555-7
C1galt1-deficient mice exhibit thrombocytopenia due to abnormal terminal differentiation of megakaryocytes
Kudo T, Sato T, Hagiwara K, Kozuma Y, Yamaguchi T, Ikehara Y, Hamada M, Matsumoto K, Ema M, Murata S, Ohkohchi N, Narimatsu H, Takahashi S
Blood. 2013 Aug 29;122(9):1649-57
Immunoassay with Single-Walled Carbon Nanotubes as Near-Infrared Fluorescent Labels
Iizumi Y, Okazaki T, Ikehara Y, Ogura M, Fukata S, Yudasaka M
ACS Appl Mater Interfaces. 2013 Aug 28;5(16):7665-70
Glycoproteomics-based cancer marker discovery adopting dual enrichment with Wisteria floribunda agglutinin for high specific glyco-diagnosis of cholangiocarcinoma
Matsuda A, Kuno A, Matsuzaki H, Kawamoto T, Shikanai T, Nakanuma Y, Yamamoto M, Ohkohchi N, Ikehara Y, Shoda J, Hirabayashi J, Narimatsu H
J Proteomics. 2013 Jun 24;85:1-11
Haemodynamically dependent valvulogenesis of zebrafish heart is mediated by flow-dependent expression of miR-21
Banjo T, Grajcarek J, Yoshino D, Osada H, Miyasaka KY, Kida YS, Ueki Y, Nagayama K, Kawakami K, Matsumoto T, Sato M, Ogura T
Nat Commun. 2013 Jun 10;4:1978
Glycoproteomic Discovery of Serological Biomarker Candidates for HCV/HBV Infection-Associated Liver Fibrosis and Hepatocellular Carcinoma
Kaji H, Ocho M, Togayachi A, Kuno A, Sogabe M, Ohkura T, Nozaki H, Angata T, Chiba Y, Ozaki H, Hirabayashi J, Tanaka Y, Mizokami M, Ikehara Y, Narimatsu H
J Proteome Res. 2013 Jun 7;12(6):2630-40
Podocalyxin Is a Glycoprotein Ligand of the Human Pluripotent Stem Cell-Specific Probe rBC2LCN
Tateno H, Matsushima A, Hiemori K, Onuma Y, Ito Y, Hasehira K, Nishimura K, Ohtaka M, Takayasu S, Nakanishi M, Ikehara Y, Nakanishi M, Ohnuma K, Chan T, Toyoda M, Akutsu H, Umezawa A, Asashima M, Hirabayashi J
Stem Cells Transl Med. 2013 Apr;2(4):265-73
A serum "sweet-doughnut" protein facilitates fibrosis evaluation and therapy assessment in patients with viral hepatitis
Kuno A, Ikehara Y, Tanaka Y, Ito K, Matsuda A, Sekiya S, Hige S, Sakamoto M, Kage M, Mizokami M, Narimatsu H
Sci Rep. 2013 Jan 15;3:1065
Establishment and characterization of novel gastric signet-ring cell and non signet-ring cell poorly differentiated adenocarcinoma cell lines with low and high malignant potential
Murakami H, Nakanishi H, Tanaka H, Ito S, Misawa K, Ito Y,Ikehara Y, Kondo E, Kodera Y
Gastric Cancer. 2013 Jan;16(1):74-83

Page top


Comparison of LecT-Hepa and FibroScan for assessment of liver fibrosis in hepatitis B virus infected patients with different ALT levels
Du D, Zhu X, Kuno A, Matsuda A, Tsuruno C, Yu D, Zhang Y, Ikehara Y, Tanaka Y, Zhang X, Narimatsu H
Clin Chim Acta. 2012 Nov 12;413(21-22):1796-9
LecT-Hepa, a Glyco-Marker Derived from Multiple Lectins, as a Predictor of Liver Fibrosis in Chronic Hepatitis C Patients
Ito K, Kuno A, Ikehara Y, Sugiyama M, Saito H, Aoki Y, Matsui T, Imamura M, Korenaga M, Murata K, Masaki N, Tanaka Y, Hige S, Izumi N, Kurosaki M, Nishiguchi S, Sakamoto M, Kage M, Narimatsu H, Mizokami M
Hepatology. 2012 Oct;56(4):1448-56
PCR Detection of Babesia ovata from Cattle Reared in Japan and Clinical Significance of Coinfection with Theileria orientalis
Sivakumar T, Tagawa M, Yoshinari T, Ybañez AP, Igarashi I, Ikehara Y, Hata H, Kondo S, Matsumoto K, Inokuma H, Yokoyama N
J Clin Microbiol. 2012 Jun;50(6):2111-3
Different Levels of Sialyl-Tn Antigen Expressed on MUC16 in Patients With Endometriosis and Ovarian Cancer
Akita K, Yoshida S, Ikehara Y, Shirakawa S, Toda M, Inoue M, Kitawaki J, Nakanishi H, Narimatsu H, Nakada H
Int J Gynecol Cancer. 2012 May;22(4):531-8
Enhancement of metastatic ability by ectopic expression of ST6GalNAcI on a gastric cancer cell line in a mouse model
Ozaki H, Matsuzaki H, Ando H, Kaji H, Nakanishi H, Ikehara Y, Narimatsu H
Clin Exp Metastasis. 2012 Mar;29(3):229-38
Identification of Core Proteins Carrying the Sialyl Lewis a Epitope in Pancreatic Cancers
Hirao Y, Ogasawara S, Togayachi A, Matsuno Y, Ocho M, Yamashita K, Watanabe M, Nakamori S, Ikehara Y, Narimatsu H
J Mol Biomark Diagn. 2012 Mar 23;3(3):e124

Page top